PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16670
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family ERF
Protein Properties Length: 230aa    MW: 25072.3 Da    PI: 10.0424
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16670genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.32.5e-2096146255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+++AeIrdp +ng  +r++lg+f taeeAa a+++a+ +++g
  PEQU_16670  96 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTFETAEEAALAYDRAAYRMRG 146
                 8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.13E-2995156No hitNo description
Gene3DG3DSA:3.30.730.106.0E-3395155IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-2396155IPR016177DNA-binding domain
SMARTSM003801.1E-3896160IPR001471AP2/ERF domain
PfamPF008471.3E-1496146IPR001471AP2/ERF domain
PROSITE profilePS5103224.38196154IPR001471AP2/ERF domain
PRINTSPR003672.3E-1197108IPR001471AP2/ERF domain
PRINTSPR003672.3E-11120136IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    Send to blast
SLDSIRRHLL DDSEMSSSAV TAPPQTVYHR TSSFGRLVAD HWIDLPFRPA IVIYLTPHDA  60
FSHGWLPSAC HPAAPVPPLP AKPDSREMEA PAKGKHYRGV RQRPWGKFAA EIRDPAKNGA  120
RVWLGTFETA EEAALAYDRA AYRMRGSRAL LNFPQQISVE ADSPSPAAAK RVSPERSTLS  180
LSSSSSLPIS QSEGSTKRRK RGEAVASLRL ESPATVMAYP DPAAVQLPAQ
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-3992158167ATERF1
3gcc_A1e-3992158167ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009384458.11e-62PREDICTED: ethylene-responsive transcription factor 2-like
SwissprotQ9LW501e-52ERF2_NICSY; Ethylene-responsive transcription factor 2
TrEMBLA0A0F6RA574e-57A0A0F6RA57_9R
TrEMBLM0RU234e-57M0RU23_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr11P20930_0011e-56(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.12e-37ethylene responsive element binding factor 1